Documentation for Mana Modeller!

• Mana Modeller modules
  • batchs module
    • write_div_enum_script()
    • write_rxn_enum_script()
  • dars module
    • calculate_freq_ctrls()
    • calculate_frequencies()
    • calculate_frequencies_for_dir()
    • compute_scores()
    • findCircleCenter()
    • rescale_and_rotate()
    • rotate()
  • modelling module
    • eval_gpr_activity()
    • find_high_low_exprs()
    • find_reactions_expression_levels()
    • fullname_equation()
    • get_GPR_reactions()
    • get_gene_list()
    • get_reactions_ids()
    • identify_model_gene_ids()
    • map_single_column()
    • preprocess_data()
  • results_analysis module
    • dendro_reactions()
    • extract_reactions_from_clusters()
    • generate_annotation_table()
    • get_node_list()
    • visualize_gml()
  • results_processing module
    • concatenate_csv()
    • concatenate_reaction_div_enum()
    • concatenate_solutions()
    • remove_done_batchs()
    • remove_zerobiomass_solutions()
  • utils module
    • launch_multi_proc()
    • make_csvs()
    • make_pickle()
    • worker()
  • Module contents

Indices and tables

• Index

• Module Index

• Search Page